STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85770.1Putative amino acid racemase; PFAM: Alanine racemase, N-terminal domain. (355 aa)    
Predicted Functional Partners:
AEX85931.1
Putative cobalamin binding protein; PFAM: D-Lysine 5,6-aminomutase alpha subunit; B12 binding domain.
 
  
 0.970
AEX85930.1
Hypothetical protein.
 
  
  0.969
arcA
Arginine deiminase; PFAM: Amidinotransferase; TIGRFAM: arginine deiminase.
    
  0.815
AEX85115.1
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.
    
  0.814
AEX85772.1
Putative metal-dependent phosphoesterase, PHP family; PFAM: PHP domain.
       0.774
AEX85771.1
PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
       0.773
AEX84494.1
Hypothetical protein; PFAM: Hydantoinase/oxoprolinase; TIGRFAM: conserved hypothetical protein.
 
     0.688
AEX85928.1
Hypothetical protein.
 
     0.681
AEX85927.1
Hypothetical protein; PFAM: Dihydrodipicolinate reductase, N-terminus.
 
   
 0.674
AEX85929.1
Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme.
 
     0.670
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.