STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85817.1WD40-like repeat protein; PFAM: PQQ enzyme repeat. (1460 aa)    
Predicted Functional Partners:
AEX86338.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat.
  
 
 0.808
AEX85818.1
Hypothetical protein.
       0.709
AEX85819.1
Hypothetical protein.
       0.695
AEX85820.1
Hypothetical protein.
       0.680
AEX85734.1
PFAM: Tetratricopeptide repeat.
  
  
 0.440
AEX85694.1
Putative phosphohydrolase; PFAM: Calcineurin-like phosphoesterase.
  
     0.405
AEX85212.1
PFAM: Peptidase S26; Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; Belongs to the peptidase S26 family.
  
  
 0.401
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.