STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85822.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (359 aa)    
Predicted Functional Partners:
AEX86265.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.979
AEX86264.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.975
AEX86266.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
 0.967
AEX86267.1
ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter.
 
 
 0.962
AEX86263.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
  
  0.943
AEX84997.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
  
 
0.920
AEX85821.1
PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
  
 
 0.795
AEX85823.1
PFAM: HD domain; Response regulator receiver domain.
       0.699
AEX85144.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: Archaeal ATPase.
  
  
 0.616
AEX85824.1
PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist.
       0.478
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.