STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85852.1HD-GYP domain-containing protein; PFAM: HD domain. (362 aa)    
Predicted Functional Partners:
AEX85850.1
HD-GYP domain-containing protein; PFAM: HD domain.
 
    
0.817
AEX85042.1
HD-GYP domain-containing protein; PFAM: HD domain.
  
     0.775
AEX85851.1
HD-GYP domain-containing protein; PFAM: HD domain.
 
    
0.766
AEX85220.1
HD-GYP domain-containing protein; PFAM: HD domain.
  
     0.744
pnp
Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.
       0.591
AEX85849.1
Putative Zn-dependent peptidase; PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16).
       0.591
AEX84679.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
   0.505
AEX85989.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
   0.485
AEX85028.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
 
   0.433
AEX84996.1
PFAM: GGDEF domain; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain.
 
 0.422
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.