STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX85958.1Parvulin-like peptidyl-prolyl isomerase; PFAM: PPIC-type PPIASE domain. (655 aa)    
Predicted Functional Partners:
AEX86065.1
Hypothetical protein.
  
  
 0.683
AEX85913.1
PFAM: Tetratricopeptide repeat.
 
 
   0.634
AEX84998.1
Hypothetical protein.
 
  
 0.619
AEX86338.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat.
 
 
 0.579
AEX85957.1
2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain.
     
 0.578
AEX85954.1
PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family.
   
 
 0.568
AEX85956.1
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; PFAM: domain.
     
 0.552
clpP
ATP-dependent Clp protease, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.
 
 
 0.541
AEX85359.1
PFAM: Predicted permease YjgP/YjgQ family.
 
  
 0.536
AEX84643.1
Lipid A core-O-antigen ligase-like enyme; PFAM: O-Antigen ligase.
  
     0.528
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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