STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86019.1Membrane carboxypeptidase (penicillin-binding protein); PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase. (662 aa)    
Predicted Functional Partners:
AEX86383.1
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; PASTA domain.
 
 
 
 0.872
AEX85801.1
Cell division protein FtsI/penicillin-binding protein 2; PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2.
 
 
 
 0.829
AEX86018.1
PFAM: Cyclic nucleotide-binding domain.
       0.785
AEX86017.1
Hypothetical protein.
       0.773
AEX85547.1
Bacterial cell division membrane protein; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.749
AEX85486.1
Bacterial cell division membrane protein; PFAM: Cell cycle protein; Belongs to the SEDS family.
 
 
 
 0.704
AEX85546.1
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; PFAM: Glycosyltransferase family 28 C-terminal domain; Glycosyltransferase family 28 N-terminal domain.
  
  
 0.646
AEX85963.1
Metalloendopeptidase-like membrane protein; PFAM: Peptidase family M23; LysM domain.
  
   
 0.639
murC
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
 
   
 0.632
mraY
phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.
 
  
 0.629
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.