STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86052.1ABC-type Na+ transport system, ATPase component; PFAM: ABC transporter. (240 aa)    
Predicted Functional Partners:
AEX85788.1
ABC-type transport system, involved in lipoprotein release, permease component; PFAM: Predicted permease.
 
      0.900
AEX86051.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
  
 0.878
AEX85032.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
  
  0.683
rpsE
Ribosomal protein S5, bacterial/organelle type; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.
  
    0.542
AEX85908.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
  
 0.539
AEX84929.1
ABC-type multidrug transport system, permease component; PFAM: ABC-2 type transporter.
 
  
 0.505
AEX85757.1
Hypothetical protein.
  
 
 0.493
AEX85758.1
Hypothetical protein.
  
 
 0.493
AEX86049.1
PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain.
       0.481
AEX86007.1
ABC-type multidrug transport system, ATPase and permease component; PFAM: ABC transporter transmembrane region; ABC transporter.
  
 
0.470
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.