STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86077.1PFAM: Transcriptional regulator PadR-like family. (119 aa)    
Predicted Functional Partners:
AEX86075.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
       0.720
AEX86076.1
TIGRFAM: Glutaredoxin-like domain protein.
       0.718
AEX86081.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
       0.496
AEX85226.1
Biotin synthetase-like uncharacterized protein.
  
     0.485
AEX86078.1
PFAM: HD domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box.
     
 0.481
AEX84953.1
Biotin synthase-related enzyme; PFAM: Radical SAM superfamily.
  
     0.474
AEX86079.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.462
AEX86080.1
Hypothetical protein.
       0.459
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.