STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86079.1PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain. (552 aa)    
Predicted Functional Partners:
AEX86078.1
PFAM: HD domain; PAS fold; Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: PAS domain S-box.
 
 
 0.900
AEX85989.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
  
     0.773
AEX86080.1
Hypothetical protein.
       0.768
AEX86081.1
Esterase/lipase; PFAM: alpha/beta hydrolase fold.
       0.768
AEX86082.1
Hypothetical protein.
       0.562
AEX85823.1
PFAM: HD domain; Response regulator receiver domain.
 
  
 0.508
AEX84527.1
Putative domain HDIG-containing protein; PFAM: HD domain; GAF domain; TIGRFAM: uncharacterized domain HDIG.
 
 0.491
AEX86075.1
PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase.
   
   0.485
AEX84745.1
Histidine kinase,STAS domain-containing protein; PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; STAS domain.
  
 
 0.476
pepT
Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.
       0.474
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.