STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86095.1PFAM: Cytochrome C biogenesis protein transmembrane region. (228 aa)    
Predicted Functional Partners:
AEX86096.1
Thioredoxin-related protein.
 
   
 0.869
msrA
methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.
    
 0.795
AEX85536.1
Putative divalent heavy-metal cations transporter; PFAM: ZIP Zinc transporter.
   
    0.603
AEX84742.1
Site-specific recombinase, DNA invertase Pin; PFAM: Recombinase; Resolvase, N terminal domain.
   
    0.525
AEX86094.1
PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: putative selenium metabolism hydrolase; M20/DapE family protein YgeY.
       0.476
AEX84480.1
Rhodanese-related sulfurtransferase; PFAM: Rhodanese-like domain.
 
   
 0.446
AEX86092.1
Dihydroorotase-like cyclic amidohydrolase; PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type.
       0.404
AEX86377.1
Peroxiredoxin; PFAM: AhpC/TSA family.
  
  
 0.403
AEX86091.1
Cytosine deaminase-like metal-dependent hydrolase; PFAM: Amidohydrolase family; TIGRFAM: putative selenium metabolism protein SsnA.
       0.400
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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