STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86263.1ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region. (368 aa)    
Predicted Functional Partners:
AEX86264.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.997
AEX86265.1
PFAM: Branched-chain amino acid transport system / permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
AEX86266.1
PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter.
 
 
 0.996
AEX86267.1
ABC-type branched-chain amino acid transport systems, ATPase component; PFAM: ABC transporter.
 
 
 0.995
AEX85822.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
  
  0.943
AEX84997.1
ABC-type branched-chain amino acid transport system, periplasmic component; PFAM: Receptor family ligand binding region.
  
  
  0.920
AEX85144.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: Archaeal ATPase.
  
  
 0.616
rpmE
Ribosomal protein L31; Binds the 23S rRNA.
  
    0.467
AEX86261.1
PFAM: Inositol monophosphatase family.
       0.405
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.