STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEX86369.1ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter; Binding-protein-dependent transport system inner membrane component. (488 aa)    
Predicted Functional Partners:
AEX85264.1
Hypothetical protein.
 
  
 0.998
AEX86053.1
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: Uncharacterized conserved protein (DUF2249); Domain of unknown function (DUF1858).
 
  
 0.997
AEX85184.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
   
 0.765
AEX86373.1
PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase.
       0.748
uvrC
Excinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.
       0.741
AEX86371.1
PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain.
       0.741
AEX86372.1
PFAM: Protein of unknown function (DUF501).
       0.741
AEX85698.1
DNA polymerase elongation subunit (family B); PFAM: DNA polymerase family B; DNA polymerase family B, exonuclease domain.
  
     0.662
AEX86044.1
ABC-type multidrug transport system, ATPase component; PFAM: ABC transporter.
 
   
 0.588
AEX85144.1
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component; PFAM: Archaeal ATPase.
 
     0.580
Your Current Organism:
Marinitoga piezophila
NCBI taxonomy Id: 443254
Other names: M. piezophila KA3, Marinitoga piezophila KA3, Marinitoga piezophila str. KA3, Marinitoga piezophila strain KA3, Thermotogales sp. KA3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.