STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB12445.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (421 aa)    
Predicted Functional Partners:
KKB12458.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.969
KKB12372.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.958
KKB12370.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.953
KKB12373.1
Primosome assembly protein PriA; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.927
KKB12374.1
Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.919
KKB12459.1
Capsid protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.828
KKB12376.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.738
KKB12375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.729
KKB12368.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.711
KKB12369.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.707
Your Current Organism:
Devosia geojensis
NCBI taxonomy Id: 443610
Other names: D. geojensis, DSM 19414, Devosia geojensis Ryu et al. 2008, Devosia sp. BD-c194, KCTC 22082, strain BD-c194
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.