STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KKB11911.1Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (250 aa)    
Predicted Functional Partners:
KKB10848.1
Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.978
KKB11910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.960
KKB11935.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.931
KKB11912.1
Histidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.913
KKB12803.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.908
KKB12804.1
ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.874
KKB12802.1
Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.812
KKB13587.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.777
KKB10529.1
Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.777
cysC
Adenylyltransferase; Catalyzes the synthesis of activated sulfate. Belongs to the APS kinase family.
   
 
 0.683
Your Current Organism:
Devosia geojensis
NCBI taxonomy Id: 443610
Other names: D. geojensis, DSM 19414, Devosia geojensis Ryu et al. 2008, Devosia sp. BD-c194, KCTC 22082, strain BD-c194
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.