STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIG4FIG4 phosphoinositide 5-phosphatase. (909 aa)    
Predicted Functional Partners:
PIKFYVE
Phosphoinositide kinase, FYVE-type zinc finger containing.
    
 0.999
VAC14
VAC14 component of PIKFYVE complex.
    
 0.995
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
   
 
 0.962
MTMR1
Myotubularin related protein 1.
     
 0.954
MTM1
Myotubularin 1.
     
 0.954
MTMR2
Myotubularin related protein 2.
     
 0.954
MTMR8
Myotubularin related protein 8.
   
 
 0.949
MTMR7
Myotubularin related protein 7.
   
 
 0.949
MTMR4
Myotubularin related protein 4.
     
 0.945
MTMR3
Myotubularin related protein 3.
     
 0.944
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.