STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LONP1Lon protease homolog, mitochondrial. (938 aa)    
Predicted Functional Partners:
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.874
SAMM50
SAMM50 sorting and assembly machinery component.
  
 
 0.838
GRPEL1
GrpE like 1, mitochondrial.
  
  
 0.795
ENSZALP00000017243
annotation not available
  
  
 0.795
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
  
 
 0.758
PEX5L
Peroxisomal biogenesis factor 5 like.
   
 0.714
PEX5
Peroxisomal biogenesis factor 5.
   
 0.714
AFG3L2
AFG3 like matrix AAA peptidase subunit 2.
  
 
 0.703
YME1L1
YME1 like 1 ATPase.
  
 
 0.699
HSPD1
Heat shock protein family D (Hsp60) member 1.
  
 0.675
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.