STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB40CRAB40C, member RAS oncogene family. (287 aa)    
Predicted Functional Partners:
GDI2
GDP dissociation inhibitor 2.
   
 0.781
ANKFY1
Ankyrin repeat and FYVE domain containing 1.
     
 0.754
RAB3IL1
RAB3A interacting protein like 1.
    
 0.729
RAB3IP
RAB3A interacting protein.
    
 0.729
MON1A
MON1 homolog A, secretory trafficking associated.
    
 0.674
ENSZALP00000009290
annotation not available
    
 0.653
EXOC7
Exocyst complex component 7.
    
 0.651
CCZ1
CCZ1 homolog, vacuolar protein trafficking and biogenesis associated.
    
 0.649
EXOC2
Exocyst complex component 2.
    
 0.647
EXOC5
Exocyst complex component 5.
    
 0.644
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.