Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSZALP00000001331annotation not available (153 aa)    
Predicted Functional Partners:
TRAF3IP2
TRAF3 interacting protein 2.
    
 0.509
ENSZALP00000001329
annotation not available
   
 0.499
ENSZALP00000008613
annotation not available
   
 0.499
PDCD1LG2
Programmed cell death 1 ligand 2.
   
  0.480
GRAP2
GRB2 related adaptor protein 2.
   
  0.471
ENSZALP00000015145
annotation not available
   
 
 0.461
ENSZALP00000001202
annotation not available
    
  0.448
ENSZALP00000018248
annotation not available
  
 
 0.438
ENSZALP00000005775
annotation not available
  
  
 0.437
LOC102070969
T-cell surface glycoprotein CD3 gamma chain.
   
 
 0.436
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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