STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNF8SNF8 subunit of ESCRT-II. (172 aa)    
Predicted Functional Partners:
VPS36
Vacuolar protein sorting 36 homolog.
   
 0.999
CHMP1A
Charged multivesicular body protein 1A.
     
 0.999
VPS37A
VPS37A subunit of ESCRT-I.
     
 0.999
UEVLD
UEV and lactate/malate dehyrogenase domains.
   
 0.999
CHMP6
Charged multivesicular body protein 6.
    
 0.996
C17orf75
Chromosome unknown C17orf75 homolog.
    
 0.974
VPS37B
VPS37B subunit of ESCRT-I.
     
 0.973
MVB12B
Multivesicular body subunit 12B.
     
 0.972
VPS37C
VPS37C subunit of ESCRT-I.
     
 0.970
TSG101
Tumor susceptibility 101.
    
 0.965
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.