Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
APLF | LIG3 | ENSZALP00000015099 | ENSZALP00000011516 | Aprataxin and PNKP like factor. | DNA ligase 3. | 0.775 |
APLF | LIG4 | ENSZALP00000015099 | ENSZALP00000022235 | Aprataxin and PNKP like factor. | DNA ligase 4. | 0.780 |
APLF | POLB | ENSZALP00000015099 | ENSZALP00000011591 | Aprataxin and PNKP like factor. | DNA polymerase beta. | 0.723 |
APLF | TDP1 | ENSZALP00000015099 | ENSZALP00000003088 | Aprataxin and PNKP like factor. | tyrosyl-DNA phosphodiesterase 1. | 0.757 |
APLF | XRCC5 | ENSZALP00000015099 | ENSZALP00000017861 | Aprataxin and PNKP like factor. | X-ray repair cross complementing 5. | 0.968 |
APLF | XRCC6 | ENSZALP00000015099 | ENSZALP00000007851 | Aprataxin and PNKP like factor. | X-ray repair cross complementing 6. | 0.951 |
ENSZALP00000017618 | ERCC4 | ENSZALP00000017618 | ENSZALP00000020248 | annotation not available | ERCC excision repair 4, endonuclease catalytic subunit. | 0.831 |
ENSZALP00000017618 | LIG3 | ENSZALP00000017618 | ENSZALP00000011516 | annotation not available | DNA ligase 3. | 0.873 |
ENSZALP00000017618 | LIG4 | ENSZALP00000017618 | ENSZALP00000022235 | annotation not available | DNA ligase 4. | 0.909 |
ENSZALP00000017618 | TDP1 | ENSZALP00000017618 | ENSZALP00000003088 | annotation not available | tyrosyl-DNA phosphodiesterase 1. | 0.816 |
ENSZALP00000017618 | TOP1 | ENSZALP00000017618 | ENSZALP00000016618 | annotation not available | DNA topoisomerase I. | 0.705 |
ENSZALP00000017618 | TOP1MT | ENSZALP00000017618 | ENSZALP00000018472 | annotation not available | DNA topoisomerase I mitochondrial. | 0.705 |
ENSZALP00000017618 | XRCC5 | ENSZALP00000017618 | ENSZALP00000017861 | annotation not available | X-ray repair cross complementing 5. | 0.892 |
ENSZALP00000017618 | XRCC6 | ENSZALP00000017618 | ENSZALP00000007851 | annotation not available | X-ray repair cross complementing 6. | 0.917 |
ERCC4 | ENSZALP00000017618 | ENSZALP00000020248 | ENSZALP00000017618 | ERCC excision repair 4, endonuclease catalytic subunit. | annotation not available | 0.831 |
ERCC4 | LIG3 | ENSZALP00000020248 | ENSZALP00000011516 | ERCC excision repair 4, endonuclease catalytic subunit. | DNA ligase 3. | 0.767 |
ERCC4 | LIG4 | ENSZALP00000020248 | ENSZALP00000022235 | ERCC excision repair 4, endonuclease catalytic subunit. | DNA ligase 4. | 0.955 |
ERCC4 | TDP1 | ENSZALP00000020248 | ENSZALP00000003088 | ERCC excision repair 4, endonuclease catalytic subunit. | tyrosyl-DNA phosphodiesterase 1. | 0.830 |
ERCC4 | TOP1 | ENSZALP00000020248 | ENSZALP00000016618 | ERCC excision repair 4, endonuclease catalytic subunit. | DNA topoisomerase I. | 0.552 |
ERCC4 | TOP1MT | ENSZALP00000020248 | ENSZALP00000018472 | ERCC excision repair 4, endonuclease catalytic subunit. | DNA topoisomerase I mitochondrial. | 0.552 |
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