STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKISKI proto-oncogene. (697 aa)    
Predicted Functional Partners:
SMAD2
Mothers against decapentaplegic homolog 2.
   
 0.937
SMAD3
SMAD family member 3.
   
 0.937
SMAD5
SMAD family member 5.
   
 0.843
SMAD9
SMAD family member 9.
   
 0.842
SMAD1
SMAD family member 1.
   
 0.842
NCOR2
Nuclear receptor corepressor 2.
   
 0.808
NCOR1
Nuclear receptor corepressor 1.
   
 0.808
INTS8
Integrator complex subunit 8.
   
 0.777
SKIL
SKI like proto-oncogene.
    
 
0.707
RPS27A
Ribosomal protein S27a.
    
  0.665
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.