STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSZALP00000003673annotation not available (74 aa)    
Predicted Functional Partners:
ERCC4
ERCC excision repair 4, endonuclease catalytic subunit.
    
 0.995
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.993
FAAP24
FA core complex associated protein 24.
    
 0.993
ENSZALP00000017618
annotation not available
    
 0.991
ERCC3
ERCC excision repair 3, TFIIH core complex helicase subunit.
    
 0.990
GTF2H1
General transcription factor IIH subunit 1.
    
 0.979
RPA1
Replication protein A1.
    
 0.974
GTF2H3
General transcription factor IIH subunit 3.
   
 0.969
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
    
 0.966
XPC
XPC complex subunit, DNA damage recognition and repair factor.
    
 0.965
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.