STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCARF2Scavenger receptor class F member 2. (843 aa)    
Predicted Functional Partners:
C8B
Complement C8 beta chain.
   
 0.617
TNFRSF13C
TNF receptor superfamily member 13C.
    
 0.613
TNFRSF17
TNF receptor superfamily member 17.
    
 0.605
C7
Complement C7.
   
  0.595
IL1B
Interleukin 1 beta.
    
 0.588
ENSZALP00000009268
annotation not available
    
 0.565
CD59
CD59 molecule (CD59 blood group).
    
 0.538
IL1R1
Interleukin 1 receptor type 1.
    
  0.489
LOC102065400
Interleukin-1 receptor-like 2.
    
  0.489
IL1RL1
Interleukin 1 receptor like 1.
    
  0.489
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.