STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCC1Regulator of chromosome condensation 1. (473 aa)    
Predicted Functional Partners:
RAN
RAN, member RAS oncogene family.
   
 0.991
ADGRD1
Adhesion G protein-coupled receptor D1.
   
 0.956
ENSZALP00000005274
annotation not available
   
 
 0.941
RANGAP1
Ran GTPase activating protein 1.
   
 
 0.927
RANBP2
RANBP2 like and GRIP domain containing 4.
   
 0.905
RANBP1
RAN binding protein 1.
   
 0.883
KPNA3
Karyopherin subunit alpha 3.
   
 
 0.867
RANBP3
RAN binding protein 3.
    
 
 0.826
ENSZALP00000010365
annotation not available
    
 
 0.767
XPO1
Exportin 1.
    
 
 0.767
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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