STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIFATRAF interacting protein with forkhead associated domain. (115 aa)    
Predicted Functional Partners:
TRAF6
TNF receptor associated factor 6.
    
 0.983
ALPK1
Alpha kinase 1.
   
 
 0.829
TRAF5
TNF receptor associated factor 5.
    
 0.680
TRAF4
TNF receptor associated factor 4.
    
 0.680
TRAF3
TNF receptor associated factor 3.
    
 0.678
TRAF2
TNF receptor associated factor 2.
    
 0.668
TRAF1
TNF receptor associated factor 1.
    
 0.668
RPS27A
Ribosomal protein S27a.
    
  0.665
IRAK2
Interleukin 1 receptor associated kinase 2.
    
 0.660
TRAF7
TNF receptor associated factor 7.
    
 0.617
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.