STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PKP3Plakophilin 3. (562 aa)    
Predicted Functional Partners:
PKP1
Plakophilin 1.
  
 
0.914
FMR1
FMRP translational regulator 1.
    
 0.887
FXR1
FMR1 autosomal homolog 1.
    
 0.846
DSC1
Desmocollin 1.
   
 0.796
JUP
Junction plakoglobin.
   
0.796
DSG4
Desmoglein 4.
   
 0.771
DSG2
Desmoglein 2.
   
 0.771
MET
MET proto-oncogene, receptor tyrosine kinase.
   
 0.767
PKP2
Plakophilin 2.
   
 
0.763
STAU2
Staufen double-stranded RNA binding protein 2.
    
  0.736
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.