STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL10A1Collagen type X alpha 1 chain. (677 aa)    
Predicted Functional Partners:
ENSZALP00000018393
annotation not available
 
  
 0.622
ENSZALP00000022691
annotation not available
 
  
  0.535
MYSM1
Myb like, SWIRM and MPN domains 1.
    
 0.533
C1QC
Complement C1q subcomponent subunit C.
  
 
 
0.503
COL6A2
Collagen type VI alpha 2 chain.
  
0.501
COL8A1
Collagen type VIII alpha 1 chain.
  
 
0.496
MMP13
Collagenase 3.
   
 0.495
RPS27A
Ribosomal protein S27a.
    
 0.458
SOX9
SRY-box transcription factor 9.
    
 
 0.444
ENSZALP00000016046
annotation not available
  
     0.443
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.