STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PELI2Pellino E3 ubiquitin protein ligase family member 2. (428 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.987
IRAK2
Interleukin 1 receptor associated kinase 2.
    
 0.884
TRAF6
TNF receptor associated factor 6.
   
 0.823
ENSZALP00000010664
annotation not available
    
 0.799
IRAK4
Interleukin 1 receptor associated kinase 4.
    
 0.799
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.752
RIPK1
Receptor interacting serine/threonine kinase 1.
    
 0.723
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
    
 0.667
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.648
IKBKB
Inhibitor of nuclear factor kappa B kinase subunit beta.
    
 0.644
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.