STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIVA1SIVA1 apoptosis inducing factor. (295 aa)    
Predicted Functional Partners:
BCL2L1
BCL2 like 1.
    
 0.974
BCL2
BCL2 apoptosis regulator.
    
 0.952
BCL2A1
BCL2 related protein A1.
    
 0.631
ENSZALP00000005398
annotation not available
    
 0.631
ENSZALP00000005495
annotation not available
    
 0.631
BOK
BCL2 family apoptosis regulator BOK.
    
 0.631
ENSZALP00000000146
annotation not available
    
   0.584
RAD18
RAD18 E3 ubiquitin protein ligase.
    
 
 0.539
CASP6
Caspase 6.
      
 0.526
PKIA
cAMP-dependent protein kinase inhibitor alpha.
      
 0.437
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.