STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNGCholinergic receptor nicotinic gamma subunit. (485 aa)    
Predicted Functional Partners:
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.852
CHRNA4
Cholinergic receptor nicotinic alpha 4 subunit.
  
 
0.820
CHRNA5
Cholinergic receptor nicotinic alpha 5 subunit.
  
 
0.725
CHRNB3
Cholinergic receptor nicotinic beta 3 subunit.
  
0.716
CHRFAM7A
Zonotrichia albicollis CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion (CHRFAM7A), mRNA.
   
0.641
LOC102064408
Neuronal acetylcholine receptor subunit alpha-7.
   
0.641
CHRND
Cholinergic receptor nicotinic delta subunit.
   
 
0.625
CHRNA9
Cholinergic receptor nicotinic alpha 9 subunit.
  
  
 
0.596
JAK3
Tyrosine-protein kinase JAK3.
    
  0.495
JAK2
Janus kinase 2.
    
  0.495
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.