Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ENSZALP00000010877 | LDB1 | ENSZALP00000010877 | ENSZALP00000007671 | annotation not available | LIM domain binding 1. | 0.824 |
ENSZALP00000010877 | LDB2 | ENSZALP00000010877 | ENSZALP00000008216 | annotation not available | LIM domain binding 2. | 0.792 |
ENSZALP00000010877 | PRRX1 | ENSZALP00000010877 | ENSZALP00000006927 | annotation not available | Paired related homeobox 1. | 0.551 |
GLIS1 | HHEX | ENSZALP00000003472 | ENSZALP00000008108 | GLIS family zinc finger 1. | Hematopoietically expressed homeobox. | 0.595 |
GLIS1 | PRRX1 | ENSZALP00000003472 | ENSZALP00000006927 | GLIS family zinc finger 1. | Paired related homeobox 1. | 0.531 |
HHEX | GLIS1 | ENSZALP00000008108 | ENSZALP00000003472 | Hematopoietically expressed homeobox. | GLIS family zinc finger 1. | 0.595 |
HHEX | PRRX1 | ENSZALP00000008108 | ENSZALP00000006927 | Hematopoietically expressed homeobox. | Paired related homeobox 1. | 0.513 |
HHEX | ZNF366 | ENSZALP00000008108 | ENSZALP00000020631 | Hematopoietically expressed homeobox. | Zinc finger protein 366. | 0.550 |
HHEX | ZNF710 | ENSZALP00000008108 | ENSZALP00000005292 | Hematopoietically expressed homeobox. | Zinc finger protein 710. | 0.425 |
LDB1 | ENSZALP00000010877 | ENSZALP00000007671 | ENSZALP00000010877 | LIM domain binding 1. | annotation not available | 0.824 |
LDB1 | PRRX1 | ENSZALP00000007671 | ENSZALP00000006927 | LIM domain binding 1. | Paired related homeobox 1. | 0.549 |
LDB1 | TAL1 | ENSZALP00000007671 | ENSZALP00000001521 | LIM domain binding 1. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.915 |
LDB2 | ENSZALP00000010877 | ENSZALP00000008216 | ENSZALP00000010877 | LIM domain binding 2. | annotation not available | 0.792 |
LDB2 | PRRX1 | ENSZALP00000008216 | ENSZALP00000006927 | LIM domain binding 2. | Paired related homeobox 1. | 0.549 |
LDB2 | TAL1 | ENSZALP00000008216 | ENSZALP00000001521 | LIM domain binding 2. | TAL bHLH transcription factor 1, erythroid differentiation factor. | 0.904 |
PRRX1 | ENSZALP00000010877 | ENSZALP00000006927 | ENSZALP00000010877 | Paired related homeobox 1. | annotation not available | 0.551 |
PRRX1 | GLIS1 | ENSZALP00000006927 | ENSZALP00000003472 | Paired related homeobox 1. | GLIS family zinc finger 1. | 0.531 |
PRRX1 | HHEX | ENSZALP00000006927 | ENSZALP00000008108 | Paired related homeobox 1. | Hematopoietically expressed homeobox. | 0.513 |
PRRX1 | LDB1 | ENSZALP00000006927 | ENSZALP00000007671 | Paired related homeobox 1. | LIM domain binding 1. | 0.549 |
PRRX1 | LDB2 | ENSZALP00000006927 | ENSZALP00000008216 | Paired related homeobox 1. | LIM domain binding 2. | 0.549 |
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