STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NVLNuclear VCP like. (850 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.995
UBXN7
UBX domain protein 7.
   
 0.991
GNL3
G protein nucleolar 3.
   
 0.986
GTPBP4
GTP binding protein 4.
   
 0.978
NOC3L
NOC3 like DNA replication regulator.
   
 
 0.977
GNL2
G protein nucleolar 2.
   
 0.976
WDR12
WD repeat domain 12.
   
 0.976
NOC2L
NOC2 like nucleolar associated transcriptional repressor.
   
 0.973
DDX27
DEAD-box helicase 27.
  
 0.971
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 0.970
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.