STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HTR2B5-hydroxytryptamine receptor 2B. (463 aa)    
Predicted Functional Partners:
HTR2A
5-hydroxytryptamine receptor 2A.
  
 
0.968
LOC102071789
Guanine nucleotide-binding protein G(q) subunit alpha.
    
 0.965
GNA11
Guanine nucleotide-binding protein subunit alpha-11.
    
 0.965
HTR2C
5-hydroxytryptamine receptor 2C.
    
0.961
HTR1A
5-hydroxytryptamine receptor 1A.
    
0.727
HTR1D
5-hydroxytryptamine receptor 1D.
    
0.727
HTR1B
5-hydroxytryptamine receptor 1B.
    
0.727
GNAS
GNAS complex locus.
    
 0.689
GNAL
G protein subunit alpha L.
    
 0.689
GNB1
G protein subunit beta 1.
    
 0.670
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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