STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2. (802 aa)    
Predicted Functional Partners:
TLN1
Talin 1.
    
 0.945
TLN2
Talin 2.
    
 0.945
BID
BH3 interacting domain death agonist.
   
  0.941
CAPN11
Calpain 11.
  
  
 
0.931
ENSZALP00000005398
annotation not available
   
 0.894
CAST
Calpastatin.
   
 0.883
CAPNS2
Calpain small subunit 2.
   
0.879
CAPN14
Calpain 14.
  
  
 
0.665
CASP9
Caspase 9.
    
 0.655
PDCD6
Programmed cell death 6.
   
0.533
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.