STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102065606Ubiquitin carboxyl-terminal hydrolase 12. (345 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.946
WDR20
WD repeat domain 20.
    
 0.934
RPS27A
Ribosomal protein S27a.
    
 0.805
FANCD2
FA complementation group D2.
    
 0.762
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.726
UBC
Ubiquitin C.
    
  0.726
ENSZALP00000017257
annotation not available
    
  0.715
ENSZALP00000000146
annotation not available
   
  0.703
FANCI
FA complementation group I.
    
 0.677
ENSZALP00000006474
annotation not available
    
 0.634
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.