STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNHIT6Zinc finger HIT-type containing 6. (328 aa)    
Predicted Functional Partners:
NOP58
NOP58 ribonucleoprotein.
   
 0.975
NUFIP1
Nuclear FMR1 interacting protein 1.
   
 0.951
ENSZALP00000011595
annotation not available
    
 0.890
DDX10
DEAD-box helicase 10.
   
  
 0.641
BCCIP
BRCA2 and CDKN1A interacting protein.
   
  
 0.636
LYPLAL1
Lysophospholipase like 1.
    
   0.631
LYPLA1
Lysophospholipase 1.
    
   0.631
LYPLA2
Lysophospholipase 2.
    
   0.631
RUVBL1
RuvB like AAA ATPase 1.
    
 
 0.618
BYSL
Bystin like.
   
 
 0.562
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.