STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZSWIM5Zinc finger SWIM-type containing 5. (1074 aa)    
Predicted Functional Partners:
CUL2
Cullin 2.
     
 0.747
APPBP2
Amyloid beta precursor protein binding protein 2.
   
 
  0.727
ZSWIM8
Zinc finger SWIM-type containing 8.
     
0.723
FEM1C
Fem-1 homolog C.
     
 0.609
ELOC
Elongin C.
    
 0.595
FEM1B
Fem-1 homolog B.
     
 0.546
RNF7
Ring finger protein 7.
     
 0.522
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.