STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UNC13BUnc-13 homolog B. (1613 aa)    
Predicted Functional Partners:
RIMS2
Regulating synaptic membrane exocytosis 2.
    
0.999
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 
 0.981
RIMS1
Regulating synaptic membrane exocytosis 1.
    
 0.818
LOC106630140
Uncharacterized LOC106630140.
    
 0.818
STXBP1
Syntaxin binding protein 1.
    
 0.783
SNAP25
Synaptosome associated protein 25.
   
 0.746
SYT1
Synaptotagmin 1.
   
 
 0.745
RAB3B
RAB3B, member RAS oncogene family.
   
 
 0.741
RIMS4
Regulating synaptic membrane exocytosis 4.
    
 0.739
STXBP3
Syntaxin binding protein 3.
    
 0.719
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.