STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PATJPATJ crumbs cell polarity complex component. (1846 aa)    
Predicted Functional Partners:
MPP5
Membrane palmitoylated protein 5.
    
 0.984
AMOTL1
Angiomotin like 1.
    
 0.964
PARD3
Par-3 family cell polarity regulator.
    
0.957
TJP3
Tight junction protein 3.
    
0.955
ARHGEF18
Rho/Rac guanine nucleotide exchange factor 18.
   
 0.950
AMOT
Angiomotin.
    
 0.899
CRB1
Crumbs cell polarity complex component 1.
    
 0.798
CRB2
Crumbs cell polarity complex component 2.
   
 0.791
PLCB4
Phospholipase C beta 4.
   
  0.782
MPP3
Membrane palmitoylated protein 3.
    
 0.744
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.