STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSZALP00000010521annotation not available (99 aa)    
Predicted Functional Partners:
ENSZALP00000017146
annotation not available
 
   
  0.686
LOC102075214
Rab5 GDP/GTP exchange factor.
   
 0.669
ENSZALP00000014255
annotation not available
   
 0.669
CASQ2
Calsequestrin 2.
   
 0.623
ASB11
Ankyrin repeat and SOCS box containing 11.
   
 0.617
CACNA1C
Calcium voltage-gated channel subunit alpha1 C.
   
 
 0.594
CACNA1S
Calcium voltage-gated channel subunit alpha1 S.
   
 
 0.594
CACNA1D
Calcium voltage-gated channel subunit alpha1 D.
   
 
 0.594
ASB5
Ankyrin repeat and SOCS box containing 5.
   
 0.548
ASB9
Ankyrin repeat and SOCS box containing 9.
   
 0.522
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.