STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TESK1Testis associated actin remodelling kinase 1. (690 aa)    
Predicted Functional Partners:
TRAF7
TNF receptor associated factor 7.
   
 0.790
MIB2
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.713
RIPK4
Receptor interacting serine/threonine kinase 4.
    
0.655
ENSZALP00000003617
annotation not available
    
 0.655
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
    
 0.651
ITSN2
Intersectin 2.
   
 0.645
PELI2
Pellino E3 ubiquitin protein ligase family member 2.
    
 0.627
PELI1
Pellino E3 ubiquitin protein ligase 1.
    
 0.627
PARVB
Parvin beta.
     
 0.625
PARVA
Parvin alpha.
     
 0.625
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.