STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YKT6YKT6 v-SNARE homolog. (198 aa)    
Predicted Functional Partners:
GOSR1
Golgi SNAP receptor complex member 1.
    
 0.999
VTI1A
Vesicle transport through interaction with t-SNAREs 1A.
    
 0.998
SCFD1
Sec1 family domain containing 1.
    
 0.998
BET1
Bet1 golgi vesicular membrane trafficking protein.
    
 0.998
GOSR2
Golgi SNAP receptor complex member 2.
   
 0.998
STX16
Syntaxin 16.
    
 0.997
STX6
Syntaxin 6.
    
 0.997
VTI1B
Vesicle transport through interaction with t-SNAREs 1B.
    
 0.996
STX7
Syntaxin 7.
   
 0.995
ENSZALP00000004913
annotation not available
    
 0.993
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.