STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRPK1SRSF protein kinase 1. (662 aa)    
Predicted Functional Partners:
SRSF6
Serine/arginine-rich splicing factor 6.
    
 0.979
LOC102060784
Serine/arginine-rich splicing factor 5.
    
 0.977
ENSZALP00000007673
annotation not available
    
 0.977
SRSF4
Serine and arginine rich splicing factor 4.
    
 0.977
ENSZALP00000016005
annotation not available
    
 0.974
SRSF3
Serine and arginine rich splicing factor 3.
    
 0.963
CDC5L
Cell division cycle 5 like.
    
   0.814
ENSZALP00000007670
annotation not available
    
 0.771
ZNF318
Zinc finger protein 318.
    
 0.756
SRSF7
Serine and arginine rich splicing factor 7.
    
 0.749
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.