STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLXNC1Plexin C1. (1522 aa)    
Predicted Functional Partners:
SEMA7A
Semaphorin 7A (John Milton Hagen blood group).
    
 0.986
SEMA4D
Semaphorin 4D.
    
0.881
PLXND1
Plexin D1.
     
0.829
NRP1
Neuropilin 1.
    
 0.826
SEMA3E
Semaphorin 3E.
    
 0.796
SEMA5A
Semaphorin 5A.
    
 0.796
ERBB4
Erb-b2 receptor tyrosine kinase 4.
    
 0.779
SEMA6A
Semaphorin 6A.
    
 0.723
SEMA4A
Semaphorin 4A.
    
 0.719
SEMA6D
Semaphorin 6D.
    
0.713
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.