STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC6Coiled-coil domain containing 6. (476 aa)    
Predicted Functional Partners:
RET
Ret proto-oncogene.
     
 0.851
NCOA4
Nuclear receptor coactivator 4.
     
 0.848
LOC102073504
Serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform.
    
 
 0.646
LOC102064305
Serine/threonine-protein phosphatase 4 regulatory subunit 1.
    
 
 0.601
PPP4R1
Protein phosphatase 4 regulatory subunit 1.
    
 
 0.601
FGFR3
Fibroblast growth factor receptor 3.
     
 0.510
RELCH
RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing.
    
 
 0.510
STIL
STIL centriolar assembly protein.
     
 0.504
ENSZALP00000012153
annotation not available
     
 0.504
ENSZALP00000012156
annotation not available
     
 0.504
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.