STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2D1Ubiquitin conjugating enzyme E2 D1. (144 aa)    
Predicted Functional Partners:
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 0.999
TRIP12
Thyroid hormone receptor interactor 12.
   
 0.968
RPS27A
Ribosomal protein S27a.
    
 0.909
STUB1
STIP1 homology and U-box containing protein 1.
    
 0.897
RBX1
Ring-box 1.
   
 0.874
ZFAND4
Zinc finger AN1-type containing 4.
   
 0.867
PEX12
Peroxisomal biogenesis factor 12.
    
 0.856
UBE2V2
Ubiquitin conjugating enzyme E2 V2.
   
 0.849
ENSZALP00000017618
annotation not available
    
 0.848
CUL1
Cullin 1.
   
 0.848
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.