STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102060476Cadherin-13. (437 aa)    
Predicted Functional Partners:
LOC102069715
Cadherin-13.
 
      0.891
CTNNB1
Catenin beta 1.
    
 0.829
JUP
Junction plakoglobin.
    
 0.817
CDH12
Cadherin 12.
     
0.728
CDH22
Cadherin 22.
     
0.708
CDH1
Cadherin 1.
     
0.707
CTNND1
Catenin delta 1.
    
 0.707
ARVCF
ARVCF delta catenin family member.
    
 0.707
CDH17
Cadherin 17.
     
0.706
APC
APC regulator of WNT signaling pathway.
     
 0.705
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.