STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDPRPyruvate dehydrogenase phosphatase regulatory subunit. (879 aa)    
Predicted Functional Partners:
GCSH
Glycine cleavage system protein H.
  
 0.979
GLDC
Glycine decarboxylase.
  
 0.956
ENSZALP00000006439
annotation not available
  
 
 0.934
GART
annotation not available
  
 
 0.934
PIPOX
Pipecolic acid and sarcosine oxidase.
  
0.896
SHMT1
Serine hydroxymethyltransferase 1.
  
 0.895
DAO
D-amino acid oxidase.
  
 0.873
MTHFD2L
Methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like.
  
 
 0.864
DDO
D-aspartate oxidase.
  
 0.852
ACADM
acyl-CoA dehydrogenase medium chain.
  
 0.834
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.