STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102068537Interleukin-8. (106 aa)    
Predicted Functional Partners:
CXCR5
C-X-C motif chemokine receptor 5.
     
 0.925
ENSZALP00000013823
annotation not available
  
  
 
0.842
CXCL12
C-X-C motif chemokine ligand 12.
   
 
 0.653
ENSZALP00000004158
annotation not available
  
 
0.598
ENSZALP00000009986
annotation not available
   
 0.586
LOC102061974
Interleukin-8-like.
   
 
0.584
ENSZALP00000004144
annotation not available
   
 
0.514
ACKR4
Atypical chemokine receptor 4.
    
 0.512
LOC102063911
C-C motif chemokine 5.
   
 0.509
LOC102064084
C-C motif chemokine 4 homolog.
   
 0.509
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.