STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102067876Gallinacin-2-like. (60 aa)    
Predicted Functional Partners:
ENSZALP00000013852
annotation not available
   
 
 0.942
ENSZALP00000020905
annotation not available
   
 
 0.942
ENSZALP00000020891
annotation not available
   
 
 0.931
ENSZALP00000013867
annotation not available
   
 
 0.799
CCR6
C-C motif chemokine receptor 6.
     
 0.644
ENSZALP00000000098
annotation not available
   
 
 0.625
ENSZALP00000001155
annotation not available
   
 
 0.625
ENSZALP00000001673
annotation not available
   
 
 0.625
ENSZALP00000013849
annotation not available
   
 
 0.625
ENSZALP00000020894
annotation not available
   
 
 0.625
Your Current Organism:
Zonotrichia albicollis
NCBI taxonomy Id: 44394
Other names: Z. albicollis, white-throated sparrow
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